Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPSSNVTEFVLLGLTQDPDVKKTLFVMFLLIYIVTMVGNLLIWVTTIGSPSLGSLMYFFLAYLSLMDAIYSTAMSPKLMIDLLCDKIAISLSACMGQLFIEHLLGGAEVFLLVVMAYDRYVAISKPLHYLNIMNRLVCILLLVVAMIGGFVHSVVQIVFLYSLPICGPNVIDHSVCDMYPLLELLCLDTYFIGLTVVANGGIICMVIFTFLLISCGVILNFLKTYSQEERHKALPTCISHIIVVALVFVPCI--FMYVRPVSNFPFDKLMTVFYSIITLMLNPLIYSLRQSEMKNAMKNLWCEKLSIVRKRVSPTLNIFIPSSKATNRR |
1KKG Chain:A ((1-108)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK-DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63584 for 730 contacts (-87.1/contact) +
2D Compatibility (PS) -10923 + (NN) -627 + (LL) 20288
1D Compatibility (HY) -400 + (ID) 750
Total energy: -55996.0 ( -76.71 by residue)
QMean score : 0.323
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