Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MTLVSFFSFLSKPLIMLLSNS------------------------SWRLSQPSFLLVGIPGLEESQHW---IALPLGILYLLALVGNVTIL-----FIIWMDPSL-HQSMYLFLSMLAAIDLVLASS--------------TAPKALAVL-------LVHAHEIGY-IVCLIQMFFIHAFSSMESGVLVAMAL----------------DCYVAIC------------HPLHHSTILH------PGVIGCIG--MVVLVRGL--LLLIPFPILLGKLIFCQA----TIIG-----------HAYCEHMAVVKLACSETTVNRAYGLTMALLVIGLDVLAIGVSYAHILQAVLKVPGSEARLK-------AFSTCGSHICVILVFYVPGIFSFLTHRFGHHVPHHVHVLLATWYLLMPPALNPLVYGVKTQQIRQRVLRVFTQKD------------------------- |
| 4TR2 Chain:A ((54-627)) | DDVHKIISELRFLQKVETILESSNMSVSDVEADANAYNPDRDAPKEELQKLQDKKSLRLIVSENHATSPSFFEESLLQEDVVSFIQSKGKLSNLKNLKSMIIDLNSDMTDEELAEYISLLERKGALIESDKLVGADYKFNDEYRNLQWGLDLARLDETQDLINANRVSVTKICVIDSGIDYNHPDLRNNIDVNVKELHGRKGVDDDSNGVVDDVYGANFVNNSGDPMDDNYHGTHVSGIISAVGNNGIGIVGVDGHSKLVICKALDQHKLGRLGDMFKCIDYCISRQAHMINGSFSFDEYSNIFNASVEHLRSLGILFFVSASNCAHDKLSKPDIAKCD-LAVNHRYPPILSKTHNNVIAVANLKRDLDESYSLSVNSFYSNIYCQLAAPGTNIYSTTPMNNYRKLNGTSMASPHVAAIASIVRSINPNLTYLQIVEILRNAIVKLPSLTERVSWGGYVDILRAVNLAIDSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -365530 for 2601 contacts (-140.5/contact) +
2D Compatibility (PS) -33906 + (NN) 3422 + (LL) 192
1D Compatibility (HY) -8800 + (ID) 2950
Total energy: -407572.0 ( -156.70 by residue)
QMean score : 0.143
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