Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MSGDNSSSLTPGFFILNGVPGLEATHIWISLPFCFMYIIAVVGNCGLICLISHEEALHRPMYYFLALLSFTDVTLCTTMVPN--MLCIFWFNLKEIDFNACLAQMF----FVHMLTGMESGVLMLMALDRYVAICYPL--RYATILTNP---------VIAKAGLATFLRN-----VMLIIPFTLLTKRLPYCRGNFIPHTYCDHM------SVAKVSC----------GNFKVNAIYGLMV---ALLIGVFDICCISVSYTMILQAVMSLSSADAR-------HKAFSTCTSHMCSIV--ITYVAAFFTFFTHRFVGHNIPN--------HIHIIVANLYLLLPP---TMNPIVYGVKTKQIQEGVIKFLLGDKVSFTYDK |
| 4EI7 Chain:A ((3-384)) | GNFSEIESQGNISLKFGFLGL-GMGGCAIAAECANKETQIKNNKYPYRAILVNTNSQDFNKIEIKNTGNVRKIQLEGYEQGAARNPQVGEEAFVKHETKIFEAVKQEFEDRDFIWITCGLGGG-TGTGALLKAIEMLYEHDYNFGLLLTLPRDAEALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSALANEYTSYSNKYIADALHEINLVTSSFTPFSDTHFDASEFAQVINTPGVLSLAKLELKSNQLDTENPLGYLTQLGNALEKGVLYDTEREELESAKKSALSIVTSPLRAGRLYNFSFLNQMENFLKERTPYVDERPIAPYVNKHTTKKEEDIVKFYSVVAGLPLPKRVSDIIDEITRIKEEREQAN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EI7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -366341 for 2460 contacts (-148.9/contact) +
2D Compatibility (PS) -32235 + (NN) 7052 + (LL) 52
1D Compatibility (HY) 2000 + (ID) 2050
Total energy: -391522.0 ( -159.16 by residue)
QMean score : 0.214
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