Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MPLFNSLCWFPTIHVTPPS---------------FILNGIPG-LERVHVWISL----PLCTMYIIFLV-GNLGLVYLIYYEESLHHPMYFFFGHA-----------LSLI----DLLTC--------------TTTLPNALCIFWFSLKEIN-FN---A-CLAQMFFVHGFT---------------------GVESGVL-MLMALDRYVAICYPLRYATT-L---TNP-IIAKAELATFLRGVLLMIPFPFLVKRLPFCQSNIISHTYCDHMSVVKLSCASIKVNVIYGLMVALLIGVFDICCISLSYTLILKAAISLSSSDARQKAFSTCTAHISAIIITYVPAFFTFFAHRFGGHTIPPSLHIIVANLYLLLPPTLNPIVYGVKTKQIRKSVIKFFQGDK---GAG |
| 4KQ7 Chain:A ((2-374)) | QSNMTNEMFDLAKLKSGVKNKRISSTDPTGGNRDHLEPFKPGEKRIIADIKGMGVINHIWVTIAPPPPTLSRNDIIIRMYWDGNDY-----PSVESPIGPFFGQGWDERYNYASLPLSAGPENGTGLSCYFAMPFEKGARIEIENQSDRNIDAFYFYVDYLEMAKLPKDMGRFHAWYNHNLTEALPEGETEWGVTGAQKPNTTGERNYVFMETQGKGHFVGINYYVHCPTPMWYGEGDDMWFIDGEKVPSLIGTGTEDFFNT-----AWCPKEAFSHPYFG-YPRVNNDIGWLGRTHVYRFFIED----------PIFFEKSLKGTIEHGSNN-------NLTLDLSTVAYWYQDSAVALPEAPTKAQRAPK------------------PFINHVDIHRWRDAWRKSKGNKATLWGNE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KQ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -289425 for 1939 contacts (-149.3/contact) +
2D Compatibility (PS) -29536 + (NN) 3705 + (LL) 4592
1D Compatibility (HY) -5200 + (ID) 2750
Total energy: -318614.0 ( -164.32 by residue)
QMean score : 0.057
|
|
|