Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLQKLM---EPEAGTNRTAVAEFILLGLVQTEEMQPVVFVLLLFAYLVTTGG--------NLSILAAVLVEPKLHAPMYFFLG-------NLSVLDVGCITVT---------VPAML-----------GRLLSHKSTISYDACLSQLFFFHLLAGMD----------CFLLTAMAYDRLLAICQPLTYSTRMSQTVQRMLVAASLACAF---------TNALTHTVAMSTLNFCG---------PNEVNHFYCDLPQLFQLSCSSTQLNELLLF---AVGFIMAGTPLVLIITAYSHVAAAV-LRIRSVEGRKKAFSTCGSHLTVVCLFF--GRGIFNYMRLGSEEASDKDKGVGVFNTVIN------------PMLNPLIYSLRNPDVQ-------GALWQIFLGRRSLT--------------- |
| 4QLA Chain:A ((19-442)) | LDLEEWWGPPELKQKQDTSIKPFEITFSETMVKELKERIKKRRPFAPPLEGVGFKYGFNSKQLDSWLKYWAEEYPFAERQKFLNQYPHFKTNIQGLNIHFMRITPKVPKGVEIVPLLLLHGWPGSVREFYEAIPHLTAVSKDRNFALEIIAPSLPGYGFSDAAVRPGLAAAEVAVIFKNLMARLGYKQYYVQGGD--WGALIGSAMATFFPKEIIGFHSNMALTLSPAATFLEFVGALFPSLIVEPELANRLY-PLSEKYSTLLEELGYMHIQATKPDTVGIGLTDSPAGLLAYILEKFSTWTNPDLRSKEDGGLSYRWTKDQLIDNLMLYWSTKSIVTSMRLYAESFSSRHFDLKLDEIQVQVPTWVLQAKHELAYQPPCILKMKYPKLVNASVIEDGGHFLAFELPEIFAKDVLKAIGEFRKLKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212139 for 2162 contacts (-98.1/contact) +
2D Compatibility (PS) -33302 + (NN) 1145 + (LL) 300
1D Compatibility (HY) -9200 + (ID) 3000
Total energy: -256196.0 ( -118.50 by residue)
QMean score : 0.183
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