Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSLNQTRVTEFVFLGLTDNRVLEMLFFMAFS------AIYMLTLSGNILIIIATVFTPSLHTPMYFFLSNLSFIDICHSSVTVPKMLEGLLLER-KTISFDNCITQLFFLHLFACAEI----FLLIIVAYDRYV-----AICTPLHYPNVMNMRVCIQLV-----------------FALWLGG-----TVHSLGQTFLTIRLPYCGPNIIDSYFCDVPLVIKLACTDTYLTGILIV-----------TNSGTISLSCFLAVVTS-----YMVILVSLRKHSAEGRQKALST---CSAHFMVVALFFGP--------CIFIYTRPDTSFSIDKVVSVFYTVVTPLLNPFIYTLRNEEVKSAMKQLRQRQVFFTKSYT------------------------------------ |
| 4XGC Chain:E ((1-458)) | MEAICSSLEPLF---PCREAAIETLGELIGDSSETYPSAIYLFGHSGTGKTALTRAFLKECGKRQNVRTAHLNAIECYTTKIMLEILLDSLAPDQGDALKVDNMLDFVEQLRRQAATRVEDQGFLIAVDNAERLRDMDANVLPVLLRLQELTNLNLCVILLSQLPFEKFYNKTGLSEIVCLHLAQYNKAETQRILGSDFQQVRNQLLEQKKRLEICQEA---VTEDFYNNYLNLFLSVFYKACRDVPELQLTARKCLSTYLEPVLDGTSRLWRHIAGPLRSALTQIYMRIESLELPYYAKFLLIAAFLASHNAAKQDKRLFSTTLGPKSFSIDRLLAIFYAILEEKVGL------TCNLLSQISTLVHLNLLSFVSGEQNIMEGSARLQCTIGLEFVLQIGKVVGFNVRQYLCD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -294623 for 1966 contacts (-149.9/contact) +
2D Compatibility (PS) -30167 + (NN) 3713 + (LL) 1484
1D Compatibility (HY) -16400 + (ID) 2950
Total energy: -338943.0 ( -172.40 by residue)
QMean score : 0.216
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