Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNEDMEQDNTTLLTEFVLTGLTYQPEWKMPLFLVFLVIYL-----------------ITIVWNLGLIALIWNDPQLHIPMYFF-------LGSLAFVDAWISSTVTPKMLVNFLAKNRMISLSECMIQFFSFAFGGTTECFLLATMAYDRYVAICKPLLYPVIMNNSLCIRLLAFSFLGGFLHALIHE--VLIFRLTFCNSNIIHHFYCDIIPLFMISCTDPSINFLMVFILSGSIQVFTIVT----VLNSYTFALFTILKKKSVRGVRKAFSTCGAHL-LSVSLYYGPLI-FMYLRPASPQADDQDMIDSVFYTIIIPLLN-----PIIYSLRNKQVIDSFTKMVKRNV------------------------------------ |
2EJU Chain:A ((3-377)) | --LIEVQEGKAKILIPKADSPVFYNPRMALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLDPFGSPMEFLDTALRS-----AKRRGILGVTATDGAPLC-------GAHPRACLRKYLAVPLRGELCHEVGTRILVGVIARYAAK--YDLGIDVILAYYKDHYFRAFVKLKDGARKGDETLEKLGYIYFDDKTGKFELEQGFLPTRPNAYGPVWLGPLKDEKIVSKMVKEAESLSLARKKQALKLLKMIDQELDIPLFYDTHAIGRRLKIETKKVEEIISALREQGYEATRTHFSPTGIKTSAPYEVFIETIKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EJU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -325800 for 2331 contacts (-139.8/contact) +
2D Compatibility (PS) -31800 + (NN) -1031 + (LL) 1568
1D Compatibility (HY) -2400 + (ID) 1650
Total energy: -361113.0 ( -154.92 by residue)
QMean score : 0.142
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