Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MGRRNNTNVPDFILTGLSDSEEVQMALFILFLLIYLITMLGN--------------------VGMILIIRLDLQLHTPMYFFLTHLSFI-----DLSYSTVI--TPKTLANLLTSNYISFMGCFAQM-----FFFVFLGAAECFLLSSMAYDRYVAICSPLRYP-----------VIMSKRLCCALVTGPYVISFINSFVNVVWMSRLHFCDSNVVRHFFCDTSPILALSCMDTYDIEIMIHILAGSTLMVSLITISA---SYVSILSTILKINSTSGKQKALSTCASHLLGVTIFYGTMIFTYLKPRKSYSLGRDQVASVFY--TIVIPMLNPLIYSLRNKEVKNALIRVMQRRQDSR- |
| 4KRT Chain:A ((7-353)) | HHHHHMQSRNNNNLKGIDVSNWKGNINFESVKNDGVEVVYIKATEGNYFKDKYAKQNYEGAKEQGLSVGFYHFFRANKGAKDQANFFIDYLNEIGAVNYDCKLALDIETTEGVGVRDLTSMCIEFLEEVKRLTGKEVVVYTYTSFANNNLDSRLGNYPVWIAHYGVNTPGANNIWSSWVGFQYSENGSVAGVNGG---CDMNEFTEEIFIDSSNFNLDNATTK---NVSTKLNIRAKGTTNSKIIGSIPAGETFKIKWVDEDYLGWYYVEYNGVVGYVNADYVEKLQMATTYN------------VSTFLNVREEGSLNSRIVDKINSGDIFRIDWVDSDFIGWYRITTKNGKVGFVNAEFVKKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239856 for 2092 contacts (-114.7/contact) +
2D Compatibility (PS) -30330 + (NN) 4645 + (LL) 1792
1D Compatibility (HY) -8000 + (ID) 2800
Total energy: -274549.0 ( -131.24 by residue)
QMean score : 0.094
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