Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------MLMNYSSATEFYLLGFPGSEELHHILFAIFFFFYLVTLMGNTVIIMIVCVDKRLQSPMYFFLGHLSALEILVTTIIVPVMLWGLLLPGMQTIYLSACVVQLFLYLAVGTTEFALLGAMAVDRYVAVC-NPLRYNIIMNRHTCNF------VVLVSWVFGFLFQIWPVYVMFQL--TYCKSNVVNNFFCDRGQLLKLSCNNTLFTEFILFLMAVFVLFGSLIPTIVSNAYI--ISTILKIPSSSGRRKSFSTCASHFTCVVIGYGSCLFLYVKPKQTQAADYNWVVSLMVSVVTPFLNPFIFTLRNDKVIEALRDGVKRCCQLFRN- |
4QNU Chain:A ((1-323)) | MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNAVEFLPEIKPYRLDLLHSV--------TAESEEPLSAGQIKRIETLMRNLMPWRKGPFSLYGVNIDTEWRSDWKWDRVLPH-----LSDLTGRTILDVGCGSG-YHMWRMIGAGAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVN---------EGELVLETL-VIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKC--GFVDIRIADVSV------TTTEEQRRTEWMV-------TESLADFLDPHDPGKTVEGYPAP-KRAVLIARKP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QNU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -300233 for 2216 contacts (-135.5/contact) +
2D Compatibility (PS) -27525 + (NN) 7822 + (LL) 4512
1D Compatibility (HY) -8000 + (ID) 2550
Total energy: -325974.0 ( -147.10 by residue)
QMean score : 0.011
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