Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGPTSVPLVKAHRSSVSDYVNYDIIVRHYNYTGKLNISADKENSIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLL-SGATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITMLKMKLH-NGSNNFRLFLLISACWVISLILGGLPIM-GWNCIS--AL------SSCSTVLPLYHKHYILF-CTTVFTLLLLSIVILYCRIYSLVRTRSRRLTFRKN------------------------------------------------------------------------------------------------------------------------------------I---------------SKASRSSEKSLALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMSCCKCPSGDSAGKFKRPIIAGMEFSRSKSDNSSHPQKDEGDNPETIMSSGNVNSSS |
| 2RH1 Chain:A ((42-477)) | ----------------------------------------------GMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFT--NQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLI--RKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254080 for 2085 contacts (-121.9/contact) +
2D Compatibility (PS) -29091 + (NN) -15923 + (LL) 3380
1D Compatibility (HY) -20400 + (ID) 3050
Total energy: -319164.0 ( -153.08 by residue)
QMean score : 0.239
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