Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRHSKRTHCPDWDSRESWGHESYRGSHKRKRRSHSSTQENRHCKPHHQFKESDCHYLEARSLNERDYRDRRYVDEYRNDYCEGYVPRHYHRDIESGYRIHCSKSSVRSRRSSPKRKRNRHCSSHQSRSKSHRRKRSRSIEDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKN---VGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHH------GHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILA-LGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPQHMIQKTRKRKYFHHNQLDWDEHSSAGRYVRR----RCKPLKEFMLCHDEEHEKLFDLVRRMLEYDPTQRITLDEALQHPFFDLLKKK
1CM8 Chain:A ((23-315))----------------------------------------------------------------------------------------------------------------------------------------------------------VRAVYRDLQPV------AVCSAVDG-RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH--EN----VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE-------------------DCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSD--------------EAKNYMKGLPELEKKDFASILT---NASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHQV


General information:
TITO was launched using:
RESULT:

Template: 1CM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -208070 for 2155 contacts (-96.6/contact) +
2D Compatibility (PS) -29239 + (NN) -6040 + (LL) 9016
1D Compatibility (HY) -25600 + (ID) 4000
Total energy: -263933.0 ( -122.47 by residue)
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_1CM8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CM8-query.scw
PDB file : Tito_Scwrl_1CM8.pdb: