Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRRRFDCRSISGLLTTTPQIPIKMENFNNFYILTSKE-LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDHSVRSSEDKTSKSSCNGTCGDREDKENIPEDSSMVSKRFRFDDSLPNPHELVSDLLC |
2X4F Chain:B ((78-346)) | --------------------VTAKQGAVNSFYTVSKTEILGGG--GQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHA-NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRL---------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2X4F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -209982 for 2109 contacts (-99.6/contact) +
2D Compatibility (PS) -27970 + (NN) -9721 + (LL) 3672
1D Compatibility (HY) -24400 + (ID) 5400
Total energy: -273801.0 ( -129.83 by residue)
QMean score : 0.454
|
|
|