Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | AGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCGAYTLPSLQG |
M046 Chain:A ((6-144)) | AGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCGAYTLPSLQG |
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General information:
TITO was launched using:
| RESULT:
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Template: M046.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2609 for 688 contacts (3.8/contact) +
2D Compatibility (PS) -9013 + (NN) 2407 + (LL) 0
1D Compatibility (HY) 3600 + (ID) 500
Total energy: -897.0 ( -1.30 by residue)
QMean score : -0.030
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