Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRGIGTDIVYIPRILRILQKYGKKFLNKIYTEQEIEISRKYNSQEMQAKYLAKRFAAKEAFVKALG-GFSHGIIMKDIEIYNDVRGKPHLTVSKNFIFKDHMIHLSLSDDGDCATAFVIICSSLP
1FTH Chain:A ((3-119))
MIVGHGIDIEELASIESAVTRH-EGFAKRVLTALEMERFTSLK-GRRQIEYLAGRWSAKEAFSKAMGTGIS-KLGFQDLEVLNNERGAPYFSQAPF----SGKIWLSISHTDQFVTASVILEEN--
General information:
TITO was launched using:
RESULT:
Template:
1FTH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61877 for 790 contacts (-78.3/contact) +
2D Compatibility (PS) -12950 + (NN) -5981 + (LL) 412
1D Compatibility (HY) -5600 + (ID) 2000
Total energy: -87996.0 ( -111.39 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_1FTH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FTH-query.scw
PDB file :
Tito_Scwrl_1FTH.pdb
: