Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------MLLGIEKRGI---------TNALWKLQEADQREVLTLTQRFELPEILARTLAIRGVNIENAGNFLYPLIRSLLPDPFH-------------LLDMDKAVFRIIQAINNDENIAIF---------------------------GDYDVDGATSSALISRYLRAIGIHSIIYIPDRVDEG-----YGLNSNAL-LQLKKKGIDLCISVDCGTLAYQPIEDAKGFGLDVIVIDHHLGTEKLPSAIAVVNPNRLDESSPYNSLAAVGVSFLLTVALNKSLREQDFFAGKKEPDLFDLLDLVALGTVCDVMQITGLNRAFVSQGLKVMSARKNVGLR---VLFDALGILERPNVSRLSFNIGPCINAGGRIGEALLGARLL-------------------STDDKKEADSIALKLIDLNNAR----------KMMENEALLEAIIQVEKSTQSGANFIMVSGNWHQG-----VIGIIASRLKE--KFHLPT--------IVISLNNRIGKA-SCRSIPG---VDIGAAVLSAKCMNLIIEGGGHSMAAGFLINEDKMSDLHDFLTERFAYSTNDKALKVDGIVTAKAINLSLWNQLQRLEPFGVGNPEPRFIIQGAKIRKPEIVGVDHIKCFIVDDDVMVRAIAFRSANTHLGSAIMEGNIEAILGKISMNYWNG------NEFVQFLIEDVLTIS---------------------------------------------------------------------------------------------- |
| 1G8K Chain:A ((4-825)) | NDRITLPPANAQRTNMTCHFCIVGCGYHVYKWPELEEGGRAPEQNALGLDFRKQLPPLAVTLTPAMTNVVTEHDGARYDIMVVPDKACVVNSGLSSTRGGKMASYMYTPTGDGKERLSAPRLYAADEWVDTTWDHAMALYAGLIKKTLDKDGPQGVFFSCFDHGGAGGGFENTWGTGKLMFSAIQTPMVRIHNRPAYNSECHATREMGIGELNNAYEDAQLADVIWSIGNNPYESQTNYFLNHWLPNLQGATTSKKKERFPNENFPQARIIFVDPR-ETPSVAIARHVAGNDRVLHLAIEPGTDTALFNGLFTYVVEQGWIDKPFIEAHTKG--FDDAVKTNRLSLDECSNITGVPVDMLKRAAEWSYKPKASGQAPRTMHAYEKGIIWGNDNYVIQSALLDLVIATHNVGRRGTGCVRMGGHQEGYTRPPYPGDKKIYIDQELIKGKGRIMTWWGCNNFQTSNNAQALREAILQRSAIVKQAMQKARGATTEEMVDVIYEATQNGGLFVTSINLYPTKLAEAAHLMLPAAHPGEMNLTSMNGERRIRLSEKFMDPPGTAMADCLIAARIANALRDMYQKDGKAEMAAQF-EGFDWKTEEDAFNDGFRRAGQPGAPAIDSQGGSTGHLVT-YDRLRKSGNNGVQLPVV--SWDESKGLVGTEMLYTEGKFDTDDGKAHFKPAPWNGLPATVQQQKDKYRFWLNNGRNNEVWQTAYHDQYNSLMQERYPMAYIEMNPDDCKQLDVTGGDIVEVYNDFGSTFAMVYPVAEIKRGQTFMLFGYVNGIQGDVTTDWTDRDIIPYYKGTWGDIRKVGSMSEFKRTVSFKSRRFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202659 for 4417 contacts (-45.9/contact) +
2D Compatibility (PS) -60307 + (NN) -13471 + (LL) 888
1D Compatibility (HY) 4000 + (ID) 3300
Total energy: -274849.0 ( -62.23 by residue)
QMean score : 0.135
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