Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------MAAHCYIKKLKLSNFRNHLNFELDSDDSSVVIIGKNGIGKTNILEAISLLAKSNGMKKAKASEMQNR-FSNKDWAVHYDFFNGADLNSIG----------IAKSFNKKLI----------QIGGKMQSSYSSLYRISNVIWLIPQMDYILLNSPSDRLKFLDRIVSLFEENYACYYMRYRKAKRERGRLLREN---ILNKSWLSSLENIMAVNAVNILDMRLSVLKMLQDTINS-----YSTQFFPKVSLKFNSQLTLSDTAKYFQNRLRENREKDSLTGRITFCVNN-------DKFQVFCQRRDLPINLCSTGEQKLLLLSIILSS--VKARCIHYNKAPLLLLDDIMSHLDKYYRKVLI--EEMLSIRCQAWITDVDQNNFGNYIDYFKTIEL |
| 1E94 Chain:E ((7-449)) | HSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKN--ILMIGPTGVGKTEIARRLAKLANAP-FIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEKQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E94.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58820 for 2440 contacts (-24.1/contact) +
2D Compatibility (PS) -35560 + (NN) -8884 + (LL) 816
1D Compatibility (HY) 0 + (ID) 2300
Total energy: -104748.0 ( -42.93 by residue)
QMean score : 0.220
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