Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFITFEGIDGSGKTIQSELLANYFKQIHGENNMVLTREPGGTDFAEKVRGILLKDSIDPVSELLLLISMRYEHVKKVILPALKKGKIVICDRFIDSTIAYQGYGLGVDLELIRDLHKLVKIKY-PDTTFILDIDVQIGLSRAMDKNKYEEMNISFYNKVRKGFQEIAINEPDRCSIITEIEAKDNNQVHVEIVNKVTATKPVLLRK
3HJN Chain:B ((1-188))
MFITFEGIDGSGKSTQIQLLAQYLEK-RG-KKVILKREPGGTETGEKIRKILLEEEVTPKAELFLFLASRNLLVTE-IKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDGLIPDLTFYIDVDVETALKR----NRFEKRE--FLERVREGYLVLAREHPERIVVLD--GKRSIEEIHRDVVRE-----------
General information:
TITO was launched using:
RESULT:
Template:
3HJN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82704 for 1494 contacts (-55.4/contact) +
2D Compatibility (PS) -20509 + (NN) -16034 + (LL) 2396
1D Compatibility (HY) -16000 + (ID) 3650
Total energy: -136501.0 ( -91.37 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_3HJN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HJN-query.scw
PDB file :
Tito_Scwrl_3HJN.pdb
: