Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKEFEIEPLLKDKVPHQTKAVVAMSGGVDSSVAAVLLHRLGYQVIGVTLQLYGADGNSNTRKKGVCCAGQDIYDAKRVAEGT-----GFPHYILNYEEIFKKEVIESFAQTYIQGKTPIPCIKCNQTVKFRDLLQVTRNLGADVLITGHYVRRLEKNGEVKLCRGIDKSKDQSYFLFATTKEQLKLLRFPLGGFYKCNVRKLARYFSLPISEKPDSQDICFVSENYSKTIAKLAPQSIQKGKIVDVNGKVLGEHNGIVNFTVGQRKGLGIAYSEPLYVVRINTKNNEIVVGPVNALMQRKILVKELNWLEQPKKGMEVTVKLRSLHSGSLAKIYPAKEQNKAYVILNDDYFSISPGQACVAYKDEQVIGGGWICS |
| 2C5S Chain:A ((186-346)) | ----------------VGGKVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFHSPPFT------------SERAKQKVIDLAQELTKYCKRVTLHLVPFTEVQKT-I----NKE---IPSSYSMTVM-RRMMMRITERIAEERNALAITTGESLGQVASQTLDSMH-T-------------INEVTNYPVIRPLITMDKLEIIKIAEEIGTYDISIRPYKPKREKANRFEAKYDFTPLIDEAVANKETMVLQTVE--------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70191 for 1199 contacts (-58.5/contact) +
2D Compatibility (PS) -16886 + (NN) -7107 + (LL) 11532
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -87952.0 ( -73.35 by residue)
QMean score : 0.443
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