Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKISVLGSTGSIGKKTVDLLL---KRKEEYQVEALSTCSNFALLACQAKLLNARYVAISNKRFYKDLKESLLGTGIK-----VEVGTEGLMNVASL-PVDLSVVAVVGIAGLEPVMHVIESGTKVIALANKESIVCGGKLLLKKTE-EKNVQIVPIDSEHNAIFQVLQNG----NKCVE----------KIILTASGGSFLNYSLEQLRNVTVGQALSHPTWNMGKKISVDSATMMNKALEIIEAHNLFNISPNRIEAIVHPESIIHGIVIYKDGFNFAVLAEADMAIPISYALSWPERSALSYK-LDLTK-QKLTFQEPDHKRFPALKLSME--VLNSSSPHTNSIVLNAANEVAVDKFLKSRIDFLEIIKVVKLTVENFDSYTDINSLSDIINIDLESRAIAKEIIKNKVLAYS
4Y6P Chain:A ((14-410))---VAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKE--LVKNIKDYKPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAI-MNNKIVALANKESIVSAGFFLKKLLNIHKNAKIIPVDSEHSAIFQCLDNNKVLKTKCLQDNFSKINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEVIETHFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRIKTNLKPLDLAQVSTLTFHKPSLEHFPCIKLAYQAGIKGNFYP----TVLNASNEIANNLFLNNKIKYFDISSIISQVLESFNSQKVSENSEDLMKQILQIHSWAKDKATDIYNKHN


General information:
TITO was launched using:
RESULT:

Template: 4Y6P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -227856 for 3123 contacts (-73.0/contact) +
2D Compatibility (PS) -39515 + (NN) -9491 + (LL) 576
1D Compatibility (HY) -33600 + (ID) 7650
Total energy: -317536.0 ( -101.68 by residue)
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_4Y6P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Y6P-query.scw
PDB file : Tito_Scwrl_4Y6P.pdb: