Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTPITVAYGDGIGPEIMEAVLSMLR--EAEAKISIDVIEIGERVYNKEWSYGISPSGWESIERTKVLLKSPTT------------------TSQGKGHKSLNVALRKSLGLYANIRPCTSYHPVIENKFDRFDIVVIRENEEDVYTGIEHRLTGNS-----YQCTKIITRSGSEKICRYAFNYAKR------------HNRKKVTCLTKDNIMKMTDGIFHTAF---DSIAKEYPDIKAEHYIVDIGMARVATEPENFDVIVTENLYGDILSDIVAQTSGSVGLAGSSNIGSEYAMFEAVHGSAPNIAGKNIANPSGLLNAAVHMLIYIGQADVAKLVHDAWLKTLEDG-IHTADLYKEKKSKQKVGTKEFAEAVIDNIGKKPGILPELIISNGVSSKISKIQGNCEQDYKVRKLVGSDITLAWDKSSNFNQIVKLFESSNPKVIAIYSKGLAIWPGDSKSLSDQVTCRFIANNEKKTITNIDVNNLLIKLERNSFDVVRMDKLYLYDEKEGFFS |
| 3TY4 Chain:B ((18-364)) | ---------ADGIGKEVVPAARRLMENLPAKHKLKFDFIDLD--------------AGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHKVAGYSSPIVALRKKMGLYANVRPVKSLDGA---KGKPVDLVIVRENTECLYVK-EERMVQNTPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVGDNFVMSEPVHGSAPDIAGRGIANPVATFRSVALMLEFMGHQDAAADIYTAVDKVLTEGKVLTPDL------GGKSGTNEITDAVLANI---------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -120684 for 2470 contacts (-48.9/contact) +
2D Compatibility (PS) -32996 + (NN) -10612 + (LL) 10212
1D Compatibility (HY) -22800 + (ID) 6400
Total energy: -183280.0 ( -74.20 by residue)
QMean score : 0.401
|
|
|