Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPRYSRKEISAIWEENNKFNIWLKIERLACEAQAKLGVIPSNVAKRLSGAITFDVERINEIESTVKHDVIAFLTYIAEKV-GVDVRYLHYGMTSSDVLDTCFAVQLKESCNILLENLKNLLAALKKKAEDYKGTICVGRSHGMHAEPTTLGLKFTRFYAEFKRSYQRLINAQKEISICKISGAVGNFANVDPFVEEYVAKGMELVPETISSQVIPRDRHAMFFSVLGVIASSMENVAVEIRHLQRTEIAEIAEYFSTGQKGSSAMPHKCNPILSENLTGLSRLIRSYVSPALENVVLWHERDISHSSVERCIAPDACILMDFALVRLTDLIDKLAINKENIEKNLNSSKGLIFSQRILLELVNSGLTREEAYKIIQGNAMKVKQNNSDFLFELKQDRSLLEVINSEKLESLFDLKYYTKYVDHIYKKVFD-- |
| 4EEI Chain:A ((1-433)) | MIKRYDVAEISKIWADENKYAKMLEVELAILEALED-RMVPKGTAAEIRARAQIRPERVDEIEKVTKHDIIAFCTSIAEQFTAETGKFFHFGVTSSDIIDSALSLQIRDSMSYVIKDLEALCDSLLTKAEETKEIITMGRSHGMFAEPMSFGQKFLGAYVEFKRRLKDLKDFQKDGLTVQFSGAVGNYCILTTEDEKKAADILGLPVEEVSTQVIPRDRIAKLISIHGLIASAIERLAVEIRHLHRSDVFEVYEGFKK------------NPISTENLTGMARMLRSHVSIALENCVLWHERDISHSSAERFYLPDNFGIMVYALRRMKNTIDNLVVQRDIIEDRVRSTSAYLSSFYLHFLVANTPFMREDCYKIVQQVESFSKKLQKVMHDEHNIILDI------PEMDFEGIKKTYLKEIDHVFDRSVKAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192133 for 3298 contacts (-58.3/contact) +
2D Compatibility (PS) -43382 + (NN) -13903 + (LL) 904
1D Compatibility (HY) -27600 + (ID) 8150
Total energy: -284264.0 ( -86.19 by residue)
QMean score : 0.510
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