Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISKEDLLELMKIRHSRRSYGQSKLAHQEEINMLIETAWLSPSRYGDEPWRQVICNRQSNQDAWEKLLSCPTEPNQKWAKDTQILIISLSTKNFH-DHTK-IVNFWGSHDTGIANYTFMLQSYIYEFNAHQMSRFDRNKIVKNSIYQMILI
2FRE Chain:A ((9-147))
--SEYPVDPLFLDRWSPRAFDG-SPMPKEHLLTILDAAHWAPSASNHQPWRFVYAHKDS--EDWPLFVELLMEGNQKWAKNASVLLFVISRDHTISHEGEKKPSATHSFDAGAAWFSLAMQAHLLGYHAHGMGGIFKDRIVEKLDIPDGFK
General information:
TITO was launched using:
RESULT:
Template:
2FRE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26138 for 906 contacts (-28.8/contact) +
2D Compatibility (PS) -14452 + (NN) -4927 + (LL) 424
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -53193.0 ( -58.71 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_2FRE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FRE-query.scw
PDB file :
Tito_Scwrl_2FRE.pdb
: