Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLGPIIENWHEWLRCYRSYSSNTLESYMRDLKDFISFLSAHIGEEVNVGSLEKLSVPELRSWFSFRYARGINARSNTRALSVIRNFFKYIKNNYEVNNEAVFSLSRPIQRRTLPKALSISDIKTLVDFFLHNYSLQETHSSLSFQYATKKKESVLSTQLYKHCNFSLPGFQCSDTRKLIINKRTLSIKNWIPVLSIGTTEGNTKTSVKEIKLLDLGEPWIIKREIAIIVLLYGTGLRISEALNLKVSDIS---NESLIVTGKGDKQRQVFILPVVKMFIQE---YVKACPYLSVNNEAQHLFVGVRGKKLGRTYVANRLQKIRRML--------NLPEIVSPHAFRHSFATHLLQENVDIRFIQQLLGHSSLETTQVYTHLNYQDVFNMYKNFQQSLEKDKKLKL |
1DRG Chain:A ((1-323)) | ---DEVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPA------EPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENS----------------------------------------------------------------------------DRCQDIRNLAFLGIAYNTLLRIAEIARIRVKDISRTDGGRMLIHIGVEKALSLGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNFIRNLDSETGAMVRLLEDGD-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -122363 for 2153 contacts (-56.8/contact) +
2D Compatibility (PS) -31504 + (NN) -4937 + (LL) 6096
1D Compatibility (HY) -6000 + (ID) 2150
Total energy: -160858.0 ( -74.71 by residue)
QMean score : 0.376
|
|
|