Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVENEGVLLVLSSPSGAGKTTILERLLERSTNLVRSVSMTTRKPRPGEINGKDYFFVTKKEFHELCEAGQMLEYARVFEN--FYGIPKSFIEQNLSSGISVLLSIDWQGAFHLFELMREKVISVFILPPSMEELRLRLQKRNSDSASEIEHRLAEAQKEMSKRDKYDYVVINDDIDKSVEEISSILDKERLKRSGV
1ZNW Chain:A ((20-201))
-----VGRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMP-EAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESACAELVSLLV---------
General information:
TITO was launched using:
RESULT:
Template:
1ZNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112027 for 1305 contacts (-85.8/contact) +
2D Compatibility (PS) -20252 + (NN) -13677 + (LL) 1272
1D Compatibility (HY) -12000 + (ID) 3250
Total energy: -159934.0 ( -122.55 by residue)
QMean score : 0.730
(partial model without unconserved sides chains):
PDB file :
Tito_1ZNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZNW-query.scw
PDB file :
Tito_Scwrl_1ZNW.pdb
: