Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPELPEVEIISNFLFDKIKNKQISGVTVNNWNLRVPITQNIDDVIKGKVINNIKRRGKYIIWHIDNDIVVTVHLGMSGKLIYAKGEQAQNKHDHVIFSFSDNTSIIFNDPRKFGLVIILNKEQEVNFF--NDFGIEPFTDEFNGDYLQKLLKSKKVNIKSALMNNKLIVGIGNIYASESLFRARISPLRSAQDLTYKECEKLATEIKNTLSDAIIAGGSTLKDYAQPSGSVGYFQNSFYVYGKVQKPCKICNNTITLIRQNGRSTYFCNACQN |
4CIS Chain:B ((2-271)) | -PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKIIQGIIRRGKYLIFEIGDDFRLISHLRMEGKYRLATLDAPREKHDHLTMKFSDG-QLIYADVRKFGTWELISTDQVLPYFLNKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKEANQLIESSIHLLHDSIIEILQKAIKLGGSSIR-----LGSTGKMQNELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPFCQQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CIS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131447 for 2139 contacts (-61.5/contact) +
2D Compatibility (PS) -28757 + (NN) -13362 + (LL) 400
1D Compatibility (HY) -17600 + (ID) 4600
Total energy: -195366.0 ( -91.34 by residue)
QMean score : 0.469
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