Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPELPEVEIISNFLFDKIKNKQISGVTVNNWNLRVPITQNIDDVIKGKVINNIKRRGKYIIWHIDNDIVVTVHLGMSGKLIYAKGEQAQNKHDHVIFSFSDNTSIIFNDPRKFGLVIILNKEQEVNFF--NDFGIEPFTDEFNGDYLQKLLKSKKVNIKSALMNNKLIVGIGNIYASESLFRARISPLRSAQDLTYKECEKLATEIKNTLSDAIIAGGSTLKDYAQPSGSVGYFQNSFYVYGKVQKPCKICNNTITLIRQNGRSTYFCNACQN
4CIS Chain:B ((2-271))-PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKIIQGIIRRGKYLIFEIGDDFRLISHLRMEGKYRLATLDAPREKHDHLTMKFSDG-QLIYADVRKFGTWELISTDQVLPYFLNKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKEANQLIESSIHLLHDSIIEILQKAIKLGGSSIR-----LGSTGKMQNELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPFCQQ


General information:
TITO was launched using:
RESULT:

Template: 4CIS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131447 for 2139 contacts (-61.5/contact) +
2D Compatibility (PS) -28757 + (NN) -13362 + (LL) 400
1D Compatibility (HY) -17600 + (ID) 4600
Total energy: -195366.0 ( -91.34 by residue)
QMean score : 0.469

(partial model without unconserved sides chains):
PDB file : Tito_4CIS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CIS-query.scw
PDB file : Tito_Scwrl_4CIS.pdb: