Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKEKLFYTIGEVAEELHLEQHVLRFWESQ--FRQIKPIKRKGRRLYDHKCIEVIKKIKYMLYDKGYTIKGVQKEFDNNIKSSCNFGNLLPQLIDLRDYLINKINSEKSNEQL----------
1EXJ Chain:A ((3-120))
----ESYYSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYI-GTPLEEMKKAQDLEMEELFAFYTEQERQIREKLDFLSALEQTISLVKKRMKRQMEYPA
General information:
TITO was launched using:
RESULT:
Template:
1EXJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51877 for 634 contacts (-81.8/contact) +
2D Compatibility (PS) -10974 + (NN) -783 + (LL) 360
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -67424.0 ( -106.35 by residue)
QMean score : 0.321
(partial model without unconserved sides chains):
PDB file :
Tito_1EXJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EXJ-query.scw
PDB file :
Tito_Scwrl_1EXJ.pdb
: