Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSWARSSAILMLSTFAAGYQEEVLTLMEKEEEEFLSHEQVKALLEKIRGEVLKTPIWHNVMDPVDDFVGRVMN
2L2L Chain:A ((136-178))
-----------------GSPEERERMIKQLKEELRLEEAKLVLLKKLRQSQIQKEATAQK-------------
General information:
TITO was launched using:
RESULT:
Template:
2L2L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3040 for 166 contacts (18.3/contact) +
2D Compatibility (PS) -5010 + (NN) -6007 + (LL) 2480
1D Compatibility (HY) 800 + (ID) 500
Total energy: -5197.0 ( -31.31 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_2L2L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L2L-query.scw
PDB file :
Tito_Scwrl_2L2L.pdb
: