Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQSILRLLYITAVLTRYNISPYLLSPSRKSINRIRGYKLRCAFEKLGPVFIKFGQSISSRTDILNEDITNNLLLICDKLPSFSHKIAVKTIESEFNCKLSDIFSSFSEKPIAAASISQAHKATTT-EGKEVAVKILRPNIEKTFSKDIKMLFWLAGIVEKFSKQSRRLKPIELVETFAEICRLELDLRFEAAHSSELRENTKNDRGFYVPEVDWSRTSKRVLTLEWIGATPVYEVEKLN------NHKQIAINLIESFCNQVYRDCFFHADMHPGNLMIDSNNSIVALDCGIMGRIDRETCYYVIEILKGFLNRDYDRVAKVHFRAGYVSPQHKSFVTACRAIGEPIIGQPIQKISFASLLAQLLKITGDFDMKVQT--QLLLLQKTMILLEGTCRKIYP--EINVWKVVEAWTENQHKNKISYKERIKSSYPVKTIQEIFNLIEKLNLIANQKLENIQIKDRSNGKIYFLLWSMVIALIVKLLIFL |
| 3KN6 Chain:A ((428-684)) | -----------------------------------------------------------------------------------------------------------KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT-------------------------------------------QKEITALKLCE---GHPNIVKLHEVFH-DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSA-VSHMHDVGVVHRDLKPENLLFTD-LEIKIIDFGFARLKPP-----------------------------------------------NGYDESCDLWSLGVILYTMLSGQVPFQ-----CTSAVEIMKKIK--KGDF-SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61116 for 1537 contacts (-39.8/contact) +
2D Compatibility (PS) -22660 + (NN) -11009 + (LL) 22880
1D Compatibility (HY) -9600 + (ID) 1750
Total energy: -83255.0 ( -54.17 by residue)
QMean score : 0.345
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