Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLNLFNNNQVDYSRQNYIILDENKHIYNAVINDL-----SWKYLFLFGPKGSGKTHLAH-----IWQSINNAIFINVNNFISE-IRYSNA---------------FILEDVQDIQD----EATLLHCYNYMKENNKRLLITSSTSPKRLNFKLKDLSSRILSTISAKIPSASEELLRIMLIKRFSDKQLKVDLKVINYILARIERSFCSINRIIEKIDNGSMGSNVTIPFVSTLLKRDT-T------------------------------------------------------------------------------------------ |
1L8Q Chain:A ((2-324)) | ------DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIE-LDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTK----NVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKRNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKKRKFKHLVGFLEKQAFDKIC |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94142 for 1422 contacts (-66.2/contact) +
2D Compatibility (PS) -21277 + (NN) -7246 + (LL) 964
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -132501.0 ( -93.18 by residue)
QMean score : 0.342
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