Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIYCITKA-D---NGGAQTHLIQLANHFCV-HHDVYVIVGN-HGPM---IEQ-----L--------------DARVNVIILEHLVG--------P-----I---DF----KQDILAVKVLAQLFSKIKPDVIHLHSSKAGTVGRIA--KFISKSKDTRVVFTAHGWAFTEGVK--PAKK---------------FLYLVIEKLMSCITDSIICVSDFDKQLALKY--R-----FNRLK---LTTIHNGIADVPAVKQTLKS--------------QSHNNIGEVVGMLPNKQDLQINA-PTKHQFVMIARFAYPKLPQNLIAAIEILKLHNSNHAHFTFIGDGPTL--NDCQQQVVQAGLENDV-TFLGNVINASHLLS-QYDTFILISKHEGLPISIIEAMATGLPVIASHVGGISELVAD-----------NGICMMNNQPETIAKVLEKYLI---DSDY-IKMSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ |
| 1RZU Chain:A ((1-477)) | MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPE---IPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVA--------EH--FRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIV--S-LGGRLVVLGAGDVALEGALLAAASR--HHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGM---KSDVSWEKSAGLYAALYSQLIS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RZU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211773 for 3070 contacts (-69.0/contact) +
2D Compatibility (PS) -39462 + (NN) -17269 + (LL) 1080
1D Compatibility (HY) -6800 + (ID) 2850
Total energy: -277074.0 ( -90.25 by residue)
QMean score : 0.484
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