Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKNILITGVHGYIGNALKDKLIEQGHQVDQ----------INVRNQLWKSTSFKDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIFMSTMAVYGKEGQVGKSDQIDTQTPMNPTTNYGISKKFAEQALQELISDSFKVAIVRPPMIYGAHCPGNFQRLMQLSKRLPIIPNINNQR-----SALYIKHLTAFIDQLI-SLEVTGVYHPQDSFYFDTSSVMYEIRRQSHRKTVLINMPSVLNKYFNKL--SVFRKLFGNLTYSNTLYENNNALEVIPGKMSLVIADIMDETTTKDKA |
| 1N2S Chain:A ((1-298)) | --MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGT----GDIPWQETDATSPLNVYGKTKLAGEKALQDNCP---KHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEMFTTTT----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N2S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92923 for 2359 contacts (-39.4/contact) +
2D Compatibility (PS) -29750 + (NN) -2616 + (LL) 616
1D Compatibility (HY) -2000 + (ID) 2400
Total energy: -129073.0 ( -54.72 by residue)
QMean score : 0.333
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