Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAFITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEGND--MDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEKI
3UWK Chain:B ((25-228))
---FVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIG-----------DRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAGLPLAEVQAGLDRLLPNLLERL
General information:
TITO was launched using:
RESULT:
Template:
3UWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72262 for 1511 contacts (-47.8/contact) +
2D Compatibility (PS) -20664 + (NN) -8261 + (LL) 1136
1D Compatibility (HY) -10800 + (ID) 3750
Total energy: -114601.0 ( -75.84 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_3UWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWK-query.scw
PDB file :
Tito_Scwrl_3UWK.pdb
: