Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNDLKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILKGSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVYSN
4RHY Chain:B ((21-200))
---DIKSVLLTAEQIQARIAELGEQIGNDYRGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYG------GVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVY--
General information:
TITO was launched using:
RESULT:
Template:
4RHY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123643 for 1300 contacts (-95.1/contact) +
2D Compatibility (PS) -18189 + (NN) -3916 + (LL) -100
1D Compatibility (HY) -22000 + (ID) 4200
Total energy: -172048.0 ( -132.34 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_4RHY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHY-query.scw
PDB file :
Tito_Scwrl_4RHY.pdb
: