Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENILEVNQIKKYYKIKTGLLQKTQYVKAVDDVSFSIKKGQTFGLVGESGCGKSTLGKVIIRLEDATSGSIIVNGEDITRLQGKKLRKSRQQYQMIFQDPYASLNPMQMVGDIISEPILNYKKLPKEEIKKE-VLYLLKCVG----LSE--DAYYKYAHE----FSGGQRQRVGIARALALRPSLIVADEPVSALDVSVQSQVL-NLLKDLQEQFKLSYLFIAHDLSVVKHISDVIGVMYLGHIVEIASDKEIYENPKHPYTKALISSIPQIDKHNNNRIILKGELPSPSNPPQGCPFHTRCPIAKDKCKENIPQLKDIGNEHQVACFYVDKVGDLNA |
| 2FFB Chain:A ((25-239)) | -----------------------------LDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRR---QVGVVLQDNV-----------LLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDQATSALDYESEHVIMRNMHKICKGR---TVIIIAHRLSTVKN-ADRIIVMEKGKIVEQGKHKELLSEPESLYS---------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -103266 for 1504 contacts (-68.7/contact) +
2D Compatibility (PS) -21230 + (NN) -6998 + (LL) 7268
1D Compatibility (HY) -17600 + (ID) 3800
Total energy: -145626.0 ( -96.83 by residue)
QMean score : 0.417
|
|
|