Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDLPIVGKPTS-----YKTLPNRYK--DVPEIGQPMEPNVEAVKKLKPTHVLSVSTIKDEMQPFYKQLN--MKGYFYDFDSLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQKKHPKVLILMGVPGSYLVATDKSYIGDLVKIAG--------GENVIKVKDRQYISSNTENLLNINPDIILRLPHGMPEEVKKMFQKEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDADKAMTQLYDLFYKDKK------- |
| 3R5T Chain:A ((3-298)) | ------------NVWPRTFQNADGSITTIPSQPKRILSTAVTVTGTLLAIDAPVIASAATTQSTFFEQWRKLAELRQVKKLWPAGSVDLESVYVEQPDLIVVSMIGADSARDQIPLLQAIAPTILVDYSD-QTWQSLAQQLGLATGLEEQAERTIHNFEQWTKQVRDVLDLPKGRANIVSYHGPGVVNAVAKAQSAHAQLLQSVGVVLEEPDPAWQAGSIVHRDFLRIHYEHLTQLQAETTFLITMT------DQQAQAFLHDPILKNLPSIQRKQVYGLGENSFRI-DLFSAREIINSLLRRFAGEQAQSLVMPL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3R5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -52359 for 2246 contacts (-23.3/contact) +
2D Compatibility (PS) -28512 + (NN) -11088 + (LL) 2636
1D Compatibility (HY) -8800 + (ID) 2400
Total energy: -100523.0 ( -44.76 by residue)
QMean score : 0.416
|
|
|