Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLK-RAKYIGTEKPMLKNKNIALLFEKDSTRTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMGEPDEVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF |
| 1FVO Chain:B ((3-312)) | --QLKGRDLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTETGFALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASIPIINGLSDLYHPIQILADYLTLQEHY-SSLKGLTLSWIGDG-NNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEK-KKRLQAFQGYQVTMKTA-KVAASDWTFLHCLPR------------------KPEEVDDEVFYSPRSLVFPEAENRKWTIMAVMVSLLTDY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144307 for 2678 contacts (-53.9/contact) +
2D Compatibility (PS) -34301 + (NN) -23436 + (LL) 1696
1D Compatibility (HY) -21600 + (ID) 6100
Total energy: -228048.0 ( -85.16 by residue)
QMean score : 0.621
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