Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLLTRIKTETILLESDIKELIDILISPSIGTDIKYELLSSYSEREIQQQELTYIVRSLINTMYPHQPCYEGAMCVCGTGGDKSNSFNISTTVAFVVASAGVKVIKHGNKSITSNSGSTDLLNQMNIQTTTVDD-TPNQLNEKDLVFIGATESYPIMKYMQPVRKMIGKPTILNLVGPLINPYHLTYQMVG-VFDPTKLKLVAKTIKDLGRKRAIVLHGANGMDEATLSGDNLIYELTEDGEIKNYTLNATDYGLKHAPNSDFKGGSPEENLAISLNILNGKDQSSRRDVVLLNAGLSLYV-----AEKVDTIAEGIELATTLIDNGEALKKYHQMRGE |
| 3R88 Chain:B ((101-355)) | ------------------------------------------------------------------------AVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAF--ADLAEVMAGVFAARRSSVLVVHGDDGLDELTTTTTSTIWRVAA-GSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGA-RGPVRDAVVLNAAGAIVAHAGLSAEWLPAWEEGLRRASAAIDTGAA---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3R88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -105465 for 2172 contacts (-48.6/contact) +
2D Compatibility (PS) -25809 + (NN) -7406 + (LL) 6504
1D Compatibility (HY) -11200 + (ID) 4250
Total energy: -147626.0 ( -67.97 by residue)
QMean score : 0.392
|
|
|