Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MTILAEIVKYKQSLLQNGYYQDKLNTLKSVKIQNKKSFINAIEKEPKLAIIAEIKSKSPTVNDLPERDLSQQISDYEKYGANAVSILTDEKYFGGSFERLQALTTKTTLPVLCKDFIIDPLQIDVAKQA-GASMILLIVNILSDKQLKDLYNYAISQNLEVLIEVH-DRHELERAYKVNAKLIGVNNRDLKRFVTNVEHTNTILENKKPNHHYISESGIHDASDVRKILHSGIDGLLIGEALMRCDNLSEFLPQLKMQKVKS |
1PII Chain:? ((1-255)) | MQTVLAKIVADKAIWVEARKQQQPLASFQNEVQPSTRHFYDALQGARTAFILECKKASPSKGVIRDDFDPARIAAIYKH-YASAISVLTDEKYFQGSFNFLPIVSQIAPQPILCKDFIIDPYQIYLAR-YYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSN-EEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSH-FANGFLIGSALMAHDDLHAAVRRVLLG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133384 for 2167 contacts (-61.6/contact) +
2D Compatibility (PS) -26326 + (NN) -4408 + (LL) 400
1D Compatibility (HY) -17600 + (ID) 4300
Total energy: -185618.0 ( -85.66 by residue)
QMean score : 0.496
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