Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVAVVKELKQGEGRVACTPENVRKLTDAGHKVIVEKNAGIGSGFSNDMYEKEGAKIVTHEQAW--EADLVIKVKEPHES-EYQYFKKNQIIWGFLHLASSKEIVEKMQEVGVTAISGETI-IKNGKAELLAPMSAIAGQRSAIMGAYYSEAQHGGQGTLVTGVHENVDIPGSTYVIFGGGVAATNAANVALGLNAKVIIIELNDDRIKYLEDM-----------YAEKDVTVVKSTPENLAEQIKKADVFISTILIPGAKPPKLVTREMVKSMKKGSVLIDIAIDQGGTIETIRPTTISDPVYEEEGVIHYGVPNQPGAVPRTSTMALAQGNIDYILEICDK--GLEQAIKDNEALSTGVNIYQGQVTNQGLASSHDLDYKEILNVIE |
| 1PJC Chain:A ((1-361)) | MEIGVPKEIKNQEFRVGLSPSSVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAWS-REMVVKVKEPLP-AEYDLMQKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGARFLERQQGGRGVLLGGVPG---VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSN------------SAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLPYVVKLANQGL---KALETDDALAKGLNVQAHRLVHPAVQ-QVFPDLA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PJC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194486 for 2941 contacts (-66.1/contact) +
2D Compatibility (PS) -37902 + (NN) -14000 + (LL) 2140
1D Compatibility (HY) -34800 + (ID) 7050
Total energy: -286098.0 ( -97.28 by residue)
QMean score : 0.547
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