Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVDHIAGRIEA-GK--GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEES-DWKCTDRYFKTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVITYDNENAGLFGINLRYPEGFEFEKAMDRFANEIQQYGFEVKLGKVQPPHYVDKNDPFVQKLVTAYRNQTNDMTEPYTIGGGTYARNLDKGVAFGAMFSDSEDLMHQKNEYITKKQLFNATSIYLEAIYSLCVEE |
| 3CT9 Chain:A ((4-356)) | ---YDIPTMTAEAVSLLKSLISIPSISR------------EETQAADFLQNYIEAEGMQTGR-KGNNVWCLSPMFDLKKPTILLNSHIDTVKPV-------FTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRT--SQNYNLIYLASCEEEVSGKEGIESVLPGL------P--PVSF-AIVGE------------------------------------PTE-----------MQP--------------AIAEKGLMVLDVTATGKAGHAARDE-GDNAIYKVLNDIAWFRDYRFEKE-SPLL-----------------GPVKMSVTVINAGTQHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIACDAKARSF--RLNSSRIDEKHPFVQKAVKM-----GRIP--FGSPTLSDQALM--SFASVKIGPGRSSRSHTAEEYIMLKEIEEAIGIYLDLLDGLKL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92482 for 2874 contacts (-32.2/contact) +
2D Compatibility (PS) -36217 + (NN) -9734 + (LL) 6916
1D Compatibility (HY) -4800 + (ID) 3050
Total energy: -139367.0 ( -48.49 by residue)
QMean score : 0.369
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