Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MD---------DIQKIKKELSELVERVDDVEILANETADHVLELREEHKQHHNELRESHKELKDKQDKV--VDENLEQTKILNRIEERYQTQVDVAQKNEEKTLAQNKWLVGAIWALVTIVMIAVITASITALLP-------- |
| 1QGT Chain:A ((1-142)) | MDIDPYKEFGATVELLSFLPSDFFPSVRDLLDTASALYREALESPEHCSPHHTALRQAILCWGELMTLATWVGNNLEDPASRDLVVNYVNTNMGLKIR-QLLWFHISCLTFGRETVLEYLVSFGVWIRTPPAYRPPNAPILST |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 28688 for 767 contacts (37.4/contact) +
2D Compatibility (PS) -12813 + (NN) -2691 + (LL) -80
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: 7504.0 ( 9.78 by residue)
QMean score : 0.390
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