Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKN-----IDGSKDISDVTKDVIDILDHL
2ECK Chain:B ((1-213))
MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADA----MKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKIL---
General information:
TITO was launched using:
RESULT:
Template:
2ECK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52820 for 1604 contacts (-32.9/contact) +
2D Compatibility (PS) -22184 + (NN) -8563 + (LL) 364
1D Compatibility (HY) -17200 + (ID) 5200
Total energy: -105603.0 ( -65.84 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_2ECK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ECK-query.scw
PDB file :
Tito_Scwrl_2ECK.pdb
: