Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MKAKEIRDLTTSEIEEQIKSSKEELFNLRFQLATGQLEETARIRTVRKTIA-RLKTVAREREIEQSKANQ
2GV5 Chain:C ((638-710))
GPLGSKLNDILHVYEKSKERELQSQLFNAWRNRFCFYTEECNIQAISKRNYQLEKMVLKKF-RERLLEIVKSEE
General information:
TITO was launched using:
RESULT:
Template:
2GV5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9946 for 261 contacts (38.1/contact) +
2D Compatibility (PS) -7605 + (NN) -4203 + (LL) 144
1D Compatibility (HY) 1200 + (ID) 450
Total energy: -968.0 ( -3.71 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_2GV5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GV5-query.scw
PDB file :
Tito_Scwrl_2GV5.pdb
: