Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRNRVMNSVVNKYLLHNRSIMFKNDQDVERFFYKREIENRKKHKQPSTLNVKANLEKLSLDDMQVFRFNFRHQIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHIDDTFQAIQRVYDQLVSEV-----GHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPIN-GTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYP--IRQSHKAIKQIAKSIDEDVTQNN |
3QH4 Chain:A ((64-312)) | ----------------------------------------------------------EAGRPVPVRIYRAAPTPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPTAS-RSE-F-RATPAFDGEAASLMWRHYLAGQT-PSPESVPGRRGQLAGLPATLITCGEIDPFRDEVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -144155 for 2142 contacts (-67.3/contact) +
2D Compatibility (PS) -25675 + (NN) -11885 + (LL) 4924
1D Compatibility (HY) -2400 + (ID) 2000
Total energy: -181191.0 ( -84.59 by residue)
QMean score : 0.538
|
|
|