Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNIRHIRNATAVIEYGGKRILIDPMLSDKGSFDPFPNSPRQDQKNPLVELPMAIEDIINDIDLVILTHLHIDHFDPKAIEVLPKDIKIYAQNEED---------ASEVERYGFTNVSVFN--DVTHIGEIELIKTDAQHGHGEILKMTGHVHGMILKHSEEPTLYLAADTVWFEGVEKALKTYQPDVVVLNGGANQFFEGGPLVMDEHDVLKVANTLPLAQIVVVHMEAVN---HWHLSRKELNEFINSNDLGNRVVVPNDGELLTFEK------------------------------------------------------------- |
| 4JO0 Chain:A ((1-534)) | SHMRYSLRQDIAVEPVIAGWYGWSYLLPPQTLARFVHNRFNRIVESYLDDPQVHAAAVRQRRMHGGPWIHAHEHRDAIEAWYRETAPRRERLDELFEAVRRLEEDILPRHHGECLDPVYQELPAALAGRVEVFYGRDNRTADYRFVEPLMYASEYYDESWQQVRFRPVTEDAREFALTTPMLEYGPEQLLVNVPLNSPLLDAVFRGGLTGTELDDLAARFGLDGERAARFASYFEPTPEEDVLEYVGHACVFARHRGTTFLVDPVLSYSGYPGGAENR-------------FTFADLPERIDHLLITHNHQDHMLFETLLRIRHRVGRVLVPKSTNASLVDPGLGGILRRLGFTDVVEVDDLETLSCGSAEVVALPFLGEHGDLRIRS-----------------------------------KTGWLIRFGERSVLFAADSTNISPTMYTKVAEVIGPVDTVFIGMESIGAAASWIYGPLYGEPLDRRTDQSRRLNGSNFPQAREIVDALEPDEVYVYAMGLEPWMGVVMAVDYDESHPAIVDSDLLVRHVQDKGGTAERLHLRRTLRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JO0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71325 for 1559 contacts (-45.8/contact) +
2D Compatibility (PS) -22327 + (NN) -6384 + (LL) 3208
1D Compatibility (HY) -7600 + (ID) 1900
Total energy: -106328.0 ( -68.20 by residue)
QMean score : 0.429
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