Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEKIVIALGGNAIQTKEATA--EAQQTAIRRAMQNLKPLFDSPARIVISHGNGPQIGSLLIQQA-KSNSDTTPAMPLDTCGAMSQGMIGYWLETEINRILTEMNSDRTVGTIVTRVEVDKDDPRFNNPTKPIGPFYTKEEVE---------ELQKEQPDSVFKEDAGRGYRKVVASPLPQSILEHQLIRTLADGKNIVIACGGGGIPVIKKENTYEGVEAVIDKDFASEKLATLIEADTLMILTNVEN--VFINFNEPNQQQIDDIDVATLKKYAAQGKFAEGSMLPKIEAAIRFVESGENKKVIITNLEQAYEALIGNKGTHIHM |
1E19 Chain:A ((2-314)) | -GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVAGAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWRRV----------VPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYGTE--KEQWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWGG-ERAIIAHLEKAVEALEGKTGTQVLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122130 for 2513 contacts (-48.6/contact) +
2D Compatibility (PS) -32969 + (NN) -14977 + (LL) 468
1D Compatibility (HY) -22000 + (ID) 6300
Total energy: -197908.0 ( -78.75 by residue)
QMean score : 0.511
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