Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKTIKNGIMIGTLGALLLSGCSSFDAQRFACLPKDHSSKDASTKKEAQYIPKGFFDPYSSNLNHWDSTF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1SQJ Chain:A ((4-786))YEFKNVAIGGGGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPGPALDSIYLSTDAGATWKDVTQLSSPSNLEGNWGHPTNAARYKDGTPVPWLDFNNGPQWGGYGAPHGTPGLTKFGWWMSAVLIDPFNPEHLMYGTGATIWATDTLSRVEKDWAPSWYLQIDGIEENAILSLRSPKSG-------AALLSGIGDISGMKHDDLTK---------------PQKMFGAPQFSNLDSIDAAGNFPNVVVRAGSSGHEYDSACARGAYATDGGDAWTIFPTCPPGMNASHYQGSTIAVDASGSQIVWSTKLDEQASGPWYSHDYGKTWSVPAGDLKAQTANVLSDKVQDGTFYATDGGKFFVSTDGGKSYAAKGAGLVTGTSLMPAVNPWVAGDVWVPVPEGGLFHSTDFGASFTRVGTANATLVSVGAPKAPSAVFIWGTDKPGSDIGLYRSDDNGSTWTRVNDQEHNYSGPTMIEADPKVYGRVYLGTNGRGIVYADLTNEEKSTAKCANGQKGTHCY


General information:
TITO was launched using:
RESULT:

Template: 1SQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12064 for 253 contacts (-47.7/contact) +
2D Compatibility (PS) -4759 + (NN) -221 + (LL) 1156
1D Compatibility (HY) -400 + (ID) 800
Total energy: -17088.0 ( -67.54 by residue)
QMean score : 0.182

(partial model without unconserved sides chains):
PDB file : Tito_1SQJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SQJ-query.scw
PDB file : Tito_Scwrl_1SQJ.pdb: