Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDEHNQEHDHLSPKEPESYQKAYACKEQQGEEKQEASEKEGEIKEDFELKYQEMREQYLRVHADFENVKKRLERDKSMALEYAYEKIALDLLPVIDALLGAHKSAVEVDKESALTKGLELTMEKLHEVLARHGIEGIECLEEFDPNFHNAIMQVKSEEKENGKIVQVLQQGYKYKGRVLRPAMVSIAKND |
1W53 Chain:A ((1-84)) | ----------------------------------------------------MDFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPS-LPEDVFHSLDFLIEVMIGYGMAY------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1W53.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -6558 for 506 contacts (-13.0/contact) +
2D Compatibility (PS) -9257 + (NN) -8974 + (LL) 7448
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -19041.0 ( -37.63 by residue)
QMean score : 0.408
|
|
|