Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSFLEKNPFFFTLAFIFVFSIAGLVEILPNFFKSA--RPIEGLRPYTVLETAGRQIYIQE---GCYHCHSQLIRPFQAEVDRYGAYSLSGEYAYDRPFLWGSKRIGPDLHRVGDYRTTDWHEKHMLDPKSVVPHSIMPAY---------------------KHLFIKKSDFDTAYAEALTQKKVFGVPYDTENGVKLGNVEEAKKAYLEEAKKITADMKDKRVLEAIERGEVLEIVALIAYLNSLGNSRINANQNAK |
| 2C1D Chain:B ((1-137)) | -------------------------CETAPKEVVYVEGAVEASLTGAPGNPEEGVRIMTTNALGNCVACHQ--IGALPDVE--------------------FPGTIAPPLDGAGDRWTEAQLRGIVANAKMTFEGTFMPAFYKVDGFVRPGDGFSGKAGAEPLAPILNAQQIEDVVAFLVTLKE-------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2C1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -16575 for 809 contacts (-20.5/contact) +
2D Compatibility (PS) -11550 + (NN) -2516 + (LL) 9292
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -25249.0 ( -31.21 by residue)
QMean score : 0.139
|
|
|