Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVYLRKIDNQILHNKRISIKKGILEHFFDKANNQDEVDMSGILSNYNDKVSILLATDPRLGGGIKRIISAEVDKIKENRLDYELKIDDILLFTYISYKKYTLEIILLADTRYNVLNGLINNSKHLLVFSENETRTLDDGKINESVRIDGGKNIILYGVPGSGKSYTLQRDYCNNSVVEKIVFHPDYSYSDFVGQIMPSVDDSGIVSYKFNPGPFTNILKKAYHNPQTKHVLVIDEINRGNVPAIFGEIFQLLDRLKHDKDGFKKGSSEYAINNTDIANIVHNDKNASIRIPSNLWIVATMNTSDQNVFTLDTAFQRRFSMQLVENSFENVDDDFKNMKILDTDMTWQKFCTTINEKIAQNNEGLSSMEDKRFGVYFVSIDDLKSKENFAHKVIKYLWDDVFKFDRNIIFNTTKFNTLEAVVKNFIKEKDRTQFDVFSDDIKELLFNV |
1G8P Chain:A ((144-215)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRGYLYIDECNLLED-HIVDLLLDVAQSGENV----------V------------ERDGLSIRHPARFVLVGSGNPEE---GDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26517 for 391 contacts (-67.8/contact) +
2D Compatibility (PS) -7917 + (NN) -3049 + (LL) 13840
1D Compatibility (HY) -5600 + (ID) 750
Total energy: -29993.0 ( -76.71 by residue)
QMean score : 0.194
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